STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parPi_0025604zf-LYAR domain-containing protein. (372 aa)    
Predicted Functional Partners:
parPi_0009340
Brix domain-containing protein.
   
   0.957
parPi_0022367
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
   0.954
parPi_0012557
Uncharacterized protein.
   
 
 0.948
parPi_0008180
RRM domain-containing protein.
   
 
 0.943
parPi_0013784
RNA helicase.
   
 
 0.940
parPi_0016955
Brix domain-containing protein.
   
   0.939
parPi_0008522
G-patch domain-containing protein.
   
   0.938
parPi_0003053
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.935
parPi_0016467
S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
   
   0.928
parPi_0015758
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
   0.927
Your Current Organism:
Paroedura picta
NCBI taxonomy Id: 143630
Other names: P. picta, ZMB 4798
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.