STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parPi_0030171UCH domain-containing protein. (98 aa)    
Predicted Functional Partners:
parPi_0023816
Ubiquitin-like domain-containing protein.
    
 0.876
parPi_0011267
Ubiquitin-like domain-containing protein.
    
 0.862
parPi_0011671
Uncharacterized protein.
    
 0.749
parPi_0006477
Ubiquitin carboxyl-terminal hydrolase.
     
 0.706
parPi_0002192
Uncharacterized protein.
    
 0.693
parPi_0003875
Ubiquitin-like domain-containing protein.
    
 0.693
parPi_0017330
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.693
parPi_0023396
Uncharacterized protein.
    
 0.693
parPi_0024457
Ubiquitin-like domain-containing protein.
    
 0.693
parPi_0028811
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.693
Your Current Organism:
Paroedura picta
NCBI taxonomy Id: 143630
Other names: P. picta, ZMB 4798
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.