STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parPi_0031626Calponin-homology (CH) domain-containing protein. (210 aa)    
Predicted Functional Partners:
parPi_0026793
Calponin-homology (CH) domain-containing protein.
 
   
  0.941
parPi_0031989
Uncharacterized protein.
 
   
  0.927
parPi_0025526
Uncharacterized protein.
 
     0.908
parPi_0026387
Uncharacterized protein.
 
      0.867
parPi_0029614
Uncharacterized protein.
 
      0.853
parPi_0014957
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.782
parPi_0025162
Integrin beta; Belongs to the integrin beta chain family.
    
 0.726
parPi_0026216
Uncharacterized protein.
 
      0.710
parPi_0008003
Integrin beta; Belongs to the integrin beta chain family.
    
 0.697
parPi_0015781
Integrin beta; Belongs to the integrin beta chain family.
    
 0.692
Your Current Organism:
Paroedura picta
NCBI taxonomy Id: 143630
Other names: P. picta, ZMB 4798
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.