STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parPi_0032755Helicase C-terminal domain-containing protein. (39 aa)    
Predicted Functional Partners:
parPi_0007556
Uncharacterized protein.
    
 0.952
parPi_0009912
Uncharacterized protein.
   
0.952
parPi_0030486
Uncharacterized protein.
   
 0.952
parPi_0014606
USP domain-containing protein; Belongs to the peptidase C19 family.
   
 
 0.892
parPi_0015543
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
   
 0.858
parPi_0011284
RING-type domain-containing protein.
    
 0.850
parPi_0016555
Uncharacterized protein.
    
 0.843
parPi_0012311
Uncharacterized protein.
    
 0.841
parPi_0000727
Uncharacterized protein.
   
 0.835
parPi_0002822
Uncharacterized protein.
    
 0.831
Your Current Organism:
Paroedura picta
NCBI taxonomy Id: 143630
Other names: P. picta, ZMB 4798
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