STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parPi_0033085Uncharacterized protein. (76 aa)    
Predicted Functional Partners:
parPi_0007249
Uncharacterized protein.
    
 
 0.586
parPi_0007079
Uncharacterized protein.
    
 
 0.578
parPi_0007081
Uncharacterized protein.
    
 
 0.578
parPi_0027236
Neur_chan_memb domain-containing protein.
   
  
 0.574
parPi_0018525
Uncharacterized protein.
   
  
 0.574
parPi_0006566
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.545
parPi_0009844
Uncharacterized protein.
    
 
 0.503
parPi_0002110
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
      
 0.502
parPi_0014055
CNH domain-containing protein.
   
 
 0.463
parPi_0020389
Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
   
 
 0.436
Your Current Organism:
Paroedura picta
NCBI taxonomy Id: 143630
Other names: P. picta, ZMB 4798
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