STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG28453.1ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); Belongs to the helicase family. UvrD subfamily. (1103 aa)    
Predicted Functional Partners:
SFG28493.1
PD-(D/E)XK nuclease superfamily protein.
 
 
 0.999
SFF85422.1
PD-(D/E)XK nuclease superfamily protein.
 
 
 0.997
SFF90170.1
UvrD-like helicase C-terminal domain-containing protein.
 
 
 0.866
SFG27729.1
Relaxase/Mobilisation nuclease domain-containing protein.
  
 
 0.812
SFG32240.1
Relaxase/Mobilisation nuclease domain-containing protein.
  
 
 0.812
SFG74742.1
Hypothetical protein.
  
     0.576
SFG00539.1
DNA polymerase-3 subunit epsilon.
  
 
 0.571
SFF93117.1
DNA helicase-2 / ATP-dependent DNA helicase PcrA.
  
 
0.552
SFF84550.1
Hypothetical protein.
  
     0.524
recA
Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
 
 0.477
Your Current Organism:
Pontibacter chinhatensis
NCBI taxonomy Id: 1436961
Other names: CCM 8436, MCC 2070, P. chinhatensis, Pontibacter chinhatensis Singh et al. 2015, Pontibacter sp. LP51, strain LP51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.