STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH00798.1Thioredoxin; Belongs to the thioredoxin family. (101 aa)    
Predicted Functional Partners:
fusA
Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...]
  
 
 
 0.963
SFF91590.1
Thioredoxin reductase (NADPH).
 
 0.913
SFG05759.1
Thioredoxin reductase (NADPH).
  
 0.880
SFG71243.1
Thioredoxin reductase.
  
 0.880
SFH00408.1
Thioredoxin reductase (NADPH).
  
 0.880
SFH08366.1
Glutamate synthase (NADH) large subunit.
    
 
 0.855
SFH36106.1
Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 
 
 0.837
SFH12067.1
Methyl-accepting chemotaxis protein.
  
 0.776
groL
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
  
 
 0.741
SFG69499.1
Thioredoxin.
  
     0.738
Your Current Organism:
Pontibacter chinhatensis
NCBI taxonomy Id: 1436961
Other names: CCM 8436, MCC 2070, P. chinhatensis, Pontibacter chinhatensis Singh et al. 2015, Pontibacter sp. LP51, strain LP51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.