STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH20949.1Hypothetical protein. (226 aa)    
Predicted Functional Partners:
SFH20977.1
Multiple antibiotic resistance protein.
 
     0.613
SFH21001.1
Nucleotide-binding universal stress protein, UspA family.
  
    0.586
SFH08701.1
Spore maturation protein SpmA.
  
  
 0.577
SFG32704.1
Polysaccharide deacetylase.
  
     0.553
SFH40965.1
HNH endonuclease.
  
     0.529
SFF88184.1
Putative multidrug resistance efflux transporter.
  
     0.508
SFH20923.1
Membrane protein.
       0.495
SFG88436.1
Prolyl oligopeptidase family protein.
  
     0.486
SFG63138.1
Protein of unknown function.
  
     0.444
SFG32730.1
Hypothetical protein.
  
     0.442
Your Current Organism:
Pontibacter chinhatensis
NCBI taxonomy Id: 1436961
Other names: CCM 8436, MCC 2070, P. chinhatensis, Pontibacter chinhatensis Singh et al. 2015, Pontibacter sp. LP51, strain LP51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.