STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH30169.1Aspartate kinase; Belongs to the aspartokinase family. (424 aa)    
Predicted Functional Partners:
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
 
 
 0.992
SFG14788.1
Aspartate kinase.
 
0.953
SFH24738.1
Aspartate aminotransferase.
  
 0.943
SFG73777.1
Aspartate aminotransferase.
 
 0.908
SFF89335.1
Argininosuccinate synthase.
  
 
 0.903
SFH01284.1
Aspartate kinase; Belongs to the aspartokinase family.
  
  
 
0.903
SFH35391.1
Asparaginase.
  
  
 0.894
SFF89804.1
Aspartate aminotransferase.
  
 0.891
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
   
 
  0.889
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
   
 0.882
Your Current Organism:
Pontibacter chinhatensis
NCBI taxonomy Id: 1436961
Other names: CCM 8436, MCC 2070, P. chinhatensis, Pontibacter chinhatensis Singh et al. 2015, Pontibacter sp. LP51, strain LP51
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