STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN68191.1Two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ. (462 aa)    
Predicted Functional Partners:
SHN68182.1
Two component transcriptional regulator, winged helix family.
 
 0.996
SHN72681.1
Signal transduction histidine kinase.
  
0.992
SHN86158.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.984
SHN85137.1
Multi-sensor signal transduction histidine kinase.
 
 
0.943
SHN73281.1
Signal transduction histidine kinase.
 
0.932
SHN65813.1
Regulatory protein, luxR family.
   
 0.915
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
   
 0.817
SHN79836.1
Two component transcriptional regulator, winged helix family.
 
 0.811
SHN72740.1
Two component transcriptional regulator, LuxR family.
  
 0.786
SHN74612.1
Two component transcriptional regulator, winged helix family.
 
 0.777
Your Current Organism:
Bradyrhizobium erythrophlei
NCBI taxonomy Id: 1437360
Other names: B. erythrophlei, Bradyrhizobium erythrophlei Yao et al. 2015, Bradyrhizobium sp. CCBAU 53266, Bradyrhizobium sp. CCBAU 53267, Bradyrhizobium sp. CCBAU 53325, CCBAU 53325, HAMBI 3614, LMG 28425, LMG:28425
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