STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN83619.1Cupin domain-containing protein. (139 aa)    
Predicted Functional Partners:
SHN83622.1
Nicotinamidase-related amidase.
 
     0.937
SHN83624.1
FAD/FMN-containing dehydrogenase.
 
     0.914
SHN85710.1
Undecaprenyl-phosphate glucose phosphotransferase.
  
 
 0.912
SHN83616.1
Creatinine amidohydrolase.
 
     0.804
SHN83909.1
Ureidoglycolate hydrolase (allantoin degradation).
  
     0.762
SHN83627.1
Putative NADPH-quinone reductase (modulator of drug activity B).
       0.747
SHN84682.1
Hypothetical protein.
  
     0.694
SHN82795.1
Hypothetical protein.
  
     0.673
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
    
 0.667
SHN73563.1
KTSC domain-containing protein.
  
    0.604
Your Current Organism:
Bradyrhizobium erythrophlei
NCBI taxonomy Id: 1437360
Other names: B. erythrophlei, Bradyrhizobium erythrophlei Yao et al. 2015, Bradyrhizobium sp. CCBAU 53266, Bradyrhizobium sp. CCBAU 53267, Bradyrhizobium sp. CCBAU 53325, CCBAU 53325, HAMBI 3614, LMG 28425, LMG:28425
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.