STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSEC_0083ypjG family protein. (230 aa)    
Predicted Functional Partners:
CSEC_0998
Uncharacterized protein conserved in bacteria; Belongs to the BshC family.
 
   
 0.813
CSEC_0085
Glycosyltransferase.
 
 
  0.785
comF
Putative competence-related protein ComF.
       0.760
CSEC_0081
Putative secreted protein.
       0.752
CSEC_0887
Conserved hypothetical protein.
  
   
 0.692
CSEC_0967
Methyltransferase.
  
     0.599
CSEC_0431
Putative thioredoxin reductase.
  
  
 0.518
nagA
N-acetylglucosamine-6-phosphate deacetylase.
     
 0.512
pmp1
Putative polymorphic outer membrane protein.
       0.494
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
    
 0.485
Your Current Organism:
Criblamydia sequanensis
NCBI taxonomy Id: 1437425
Other names: C. sequanensis CRIB-18, Criblamydia sequanensis CRIB-18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.