STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSEC_0140Conserved hypothetical protein. (988 aa)    
Predicted Functional Partners:
CSEC_1687
Conserved hypothetical protein.
 
    0.781
neuB
Putative N-acetylneuraminate synthase.
 
  
 0.730
CSEC_0141
Conserved hypothetical protein.
 
    
0.729
CSEC_0143
Uncharacterized protein conserved in bacteria.
 
    
0.713
CSEC_0142
Conserved hypothetical protein.
 
    
0.710
CSEC_0139
Conserved hypothetical protein.
       0.661
CSEC_1603
Conserved putative secreted protein.
  
     0.620
CSEC_1322
Conserved hypothetical protein; FOG: TPR repeat.
  
   0.603
CSEC_1193
F-box and LRR domain-containing protein.
  
     0.568
spsF
Spore coat polysaccharide biosynthesis protein SpsF.
 
     0.540
Your Current Organism:
Criblamydia sequanensis
NCBI taxonomy Id: 1437425
Other names: C. sequanensis CRIB-18, Criblamydia sequanensis CRIB-18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.