STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSEC_0174ABC-type transporter, ATPase subunit. (245 aa)    
Predicted Functional Partners:
CSEC_0496
Permease, YjgP/YjgQ family.
 
 
 0.989
CSEC_0497
Permease, YjgP/YjgQ family.
   
 0.983
CSEC_2285
ABC-type transporter, permease subunit.
   
  0.933
CSEC_2284
ABC-type transporter, permease subunit.
   
  0.932
kdsA
2-dehydro-3-deoxyphosphooctonate aldolase; Belongs to the KdsA family.
 
   
 0.835
CSEC_0173
Putative secreted protein.
       0.766
exbB
Putative biopolymer transport protein ExbB.
 
     0.755
lpxA
Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
 
  
 0.740
CSEC_0172
Putative secreted protein.
       0.737
tolQ
Putative biopolymer transport protein TolQ.
 
     0.726
Your Current Organism:
Criblamydia sequanensis
NCBI taxonomy Id: 1437425
Other names: C. sequanensis CRIB-18, Criblamydia sequanensis CRIB-18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.