STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSEC_0309Hypothetical protein. (1347 aa)    
Predicted Functional Partners:
ftsK
DNA translocase FtsK; Belongs to the FtsK/SpoIIIE/SftA family.
    
   0.791
CSEC_0550
Highly conserved protein containing a thioredoxin domain.
    
   0.783
CSEC_0938
Conserved putative secreted protein.
  
 0.567
CSEC_0595
Putative adhesin.
  
 
  0.516
CSEC_0576
Putative long-chain-fatty-acid--[acyl-carrier-protein] ligase.
  
 
 0.508
CSEC_1180
Conserved putative secreted protein.
    
 
 0.494
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
   0.469
CSEC_2087
Glycosyl hydrolase.
   
 
  0.459
map1
Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
  
    0.450
CSEC_0311
Putative secreted protein.
       0.444
Your Current Organism:
Criblamydia sequanensis
NCBI taxonomy Id: 1437425
Other names: C. sequanensis CRIB-18, Criblamydia sequanensis CRIB-18
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