STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSEC_0431Putative thioredoxin reductase. (347 aa)    
Predicted Functional Partners:
CSEC_0887
Conserved hypothetical protein.
 
 0.947
trxA
Thioredoxin-related protein; Belongs to the thioredoxin family.
  
 0.922
CSEC_0411
Putative cytochrome c biogenesis protein.
  
 0.911
fdiV
Putative ferredoxin [2Fe-2S] 4.
   
 
 0.823
CSEC_1168
AhpC/TSA family protein.
  
 
 0.809
ahpC
Thioredoxin peroxidase.
  
 
 0.809
CSEC_1620
Pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.789
nifU
Putative nitrogen fixation related protein NifU.
  
 
 0.760
CSEC_0998
Uncharacterized protein conserved in bacteria; Belongs to the BshC family.
  
   
 0.745
CSEC_0085
Glycosyltransferase.
  
     0.722
Your Current Organism:
Criblamydia sequanensis
NCBI taxonomy Id: 1437425
Other names: C. sequanensis CRIB-18, Criblamydia sequanensis CRIB-18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.