STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSEC_0733ABC-type transporter, permease subunit; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (329 aa)    
Predicted Functional Partners:
CSEC_0732
ABC-type transporter, ATPase subunit.
 0.999
CSEC_0734
ABC-type transporter, substrate-binding protein.
  
 
 0.993
CSEC_1936
ABC-type transporter, ATPase subunit.
 
   
 0.546
CSEC_0735
F-box and WD repeat-containing protein.
       0.517
CSEC_1935
ABC-type transporter, permease subunit.
 
   
 0.424
hisC
Putative histidinol-phosphate aminotransferase.
 
  
 0.421
Your Current Organism:
Criblamydia sequanensis
NCBI taxonomy Id: 1437425
Other names: C. sequanensis CRIB-18, Criblamydia sequanensis CRIB-18
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