STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSEC_0758Transcriptional regulator. (167 aa)    
Predicted Functional Partners:
fadJ
Fatty acid oxidation complex subunit alpha.
  
  
 0.674
CSEC_0332
Signal transduction histidine kinase.
      
 0.669
gst
Glutathione S-transferase.
     
 0.643
fadD
Long-chain-fatty-acid--CoA ligase.
 
     0.573
fadI
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.518
pth
Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
   
    0.508
aas
Putative bifunctional protein Aas.
     
 0.411
CSEC_1489
Permease.
     
 0.411
Your Current Organism:
Criblamydia sequanensis
NCBI taxonomy Id: 1437425
Other names: C. sequanensis CRIB-18, Criblamydia sequanensis CRIB-18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.