STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tyrp1Tryptophan/tyrosine permease. (428 aa)    
Predicted Functional Partners:
dnak1
Chaperone protein DnaK; Belongs to the heat shock protein 70 family.
   
  0.800
CSEC_1164
Conserved hypothetical protein.
       0.747
uhpC
Hexose phosphate transport protein.
  
     0.522
CSEC_2147
Oxidoreductase.
  
    0.481
ntt11
ADP/ATP translocase.
  
     0.481
CSEC_2064
Acetyltransferase, GNAT family.
  
     0.478
ntt7
ADP/ATP translocase.
  
     0.446
ntt9
ADP/ATP translocase.
  
     0.436
treZ
Malto-oligosyltrehalose trehalohydrolase.
       0.433
CSEC_1167
Putative glycogen debranching enzyme.
       0.433
Your Current Organism:
Criblamydia sequanensis
NCBI taxonomy Id: 1437425
Other names: C. sequanensis CRIB-18, Criblamydia sequanensis CRIB-18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.