STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oppBPutative ABC-type oligopeptide transporter, permease subunit. (497 aa)    
Predicted Functional Partners:
oppA
ABC-type transporter, oligopeptide-binding protein.
 
 0.997
oppC
Putative ABC-type oligopeptide transporter, permease subunit.
  
 0.994
CSEC_0795
ABC-type transporter, substrate-binding protein.
 
 0.974
CSEC_1811
Oligopeptide/dipeptide ABC transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
 0.969
CSEC_0792
ABC-type transporter, ATPase subunit.
 0.968
CSEC_0793
ABC-type transporter, permease subunit.
 
 0.959
CSEC_0791
ABC-type transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
 0.945
CSEC_1810
Oligopeptide/dipeptide transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
 0.945
CSEC_2444
Putative secreted protein.
  
 0.683
CSEC_1505
Conserved putative membrane protein.
 
     0.533
Your Current Organism:
Criblamydia sequanensis
NCBI taxonomy Id: 1437425
Other names: C. sequanensis CRIB-18, Criblamydia sequanensis CRIB-18
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