STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSEC_1505Conserved putative membrane protein. (229 aa)    
Predicted Functional Partners:
fixO
Cytochrome C oxidase, mono-heme subunit.
 
     0.760
CSEC_1255
Putative membrane protein.
  
     0.686
fixN
Cytochrome c oxidase subunit I.
 
     0.662
rtpR
Adenosylcobalamin-dependent ribonucleoside-triphosphate reductase.
  
     0.646
CSEC_1662
Transporter, MFS family.
  
     0.631
oppA
ABC-type transporter, oligopeptide-binding protein.
 
     0.625
CSEC_1605
Conserved hypothetical protein.
  
     0.616
CSEC_2167
Conserved putative secreted protein.
  
     0.601
CSEC_1807
Conserved putative membrane protein.
  
     0.567
omcB
Large cysteine-rich periplasmic protein OmcB.
  
     0.553
Your Current Organism:
Criblamydia sequanensis
NCBI taxonomy Id: 1437425
Other names: C. sequanensis CRIB-18, Criblamydia sequanensis CRIB-18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.