STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSEC_1693Conserved hypothetical protein. (691 aa)    
Predicted Functional Partners:
CSEC_0576
Putative long-chain-fatty-acid--[acyl-carrier-protein] ligase.
   
 0.813
aas
Putative bifunctional protein Aas.
   
 0.759
CSEC_1489
Permease.
   
 0.759
wza
Putative capsule polysaccharide export protein.
 
     0.752
CSEC_2167
Conserved putative secreted protein.
  
     0.745
CSEC_0889
Putative L,D-transpeptidase.
 
    0.703
CSEC_1476
Hypothetical protein.
   
  0.685
CSEC_1605
Conserved hypothetical protein.
  
     0.675
greA
Transcription elongation factor GreA; Belongs to the GreA/GreB family.
 
    0.659
CSEC_2402
Conserved putative secreted protein.
  
     0.659
Your Current Organism:
Criblamydia sequanensis
NCBI taxonomy Id: 1437425
Other names: C. sequanensis CRIB-18, Criblamydia sequanensis CRIB-18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.