STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gspEGeneral secretion pathway protein E. (545 aa)    
Predicted Functional Partners:
gspF
Putative general secretion pathway protein F.
 
 0.998
gspG
Putative general secretion pathway protein G.
  
 0.956
CSEC_1726
Putative secreted protein.
  
 0.952
gspD
Putative general secretion pathway protein D.
 
  
 0.945
CSEC_1605
Conserved hypothetical protein.
   
 
 0.826
CSEC_1728
Conserved putative membrane protein.
     
 0.812
sctC
Putative type III secretion protein SctC.
 
  
 0.764
CSEC_0212
Putative membrane protein.
  
  
 0.721
CSEC_1727
Putative secreted protein.
       0.711
CSEC_1729
Putative membrane protein.
       0.705
Your Current Organism:
Criblamydia sequanensis
NCBI taxonomy Id: 1437425
Other names: C. sequanensis CRIB-18, Criblamydia sequanensis CRIB-18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.