STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSEC_1796Conserved hypothetical protein. (233 aa)    
Predicted Functional Partners:
CSEC_1662
Transporter, MFS family.
  
     0.713
omcB
Large cysteine-rich periplasmic protein OmcB.
  
     0.628
CSEC_1795
Putative secreted protein.
       0.586
CSEC_0055
Conserved hypothetical protein.
  
     0.582
CSEC_1255
Putative membrane protein.
  
     0.580
CSEC_1193
F-box and LRR domain-containing protein.
  
     0.555
rtpR
Adenosylcobalamin-dependent ribonucleoside-triphosphate reductase.
  
     0.536
CSEC_2167
Conserved putative secreted protein.
  
     0.522
CSEC_1376
Conserved hypothetical protein.
  
     0.512
CSEC_1624
Conserved putative membrane protein.
  
     0.511
Your Current Organism:
Criblamydia sequanensis
NCBI taxonomy Id: 1437425
Other names: C. sequanensis CRIB-18, Criblamydia sequanensis CRIB-18
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.