STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ntt5ADP/ATP translocase. (511 aa)    
Predicted Functional Partners:
plsB
Glycerol-3-phosphate acyltransferase.
  
     0.773
CSEC_2147
Oxidoreductase.
  
     0.699
fabI
Enoyl-[acyl-carrier-protein] reductase [NADH].
  
     0.676
CSEC_1376
Conserved hypothetical protein.
  
     0.652
CSEC_2137
Hypothetical protein.
  
     0.624
dus
tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
      
 0.529
CSEC_1990
Phospholipase/Carboxylesterase.
      
 0.529
lplA
Putative lipoate-protein ligase A.
  
     0.481
CSEC_1513
Tryptophan/tyrosine permease.
  
     0.458
tyrp3
Tryptophan/tyrosine permease.
  
     0.435
Your Current Organism:
Criblamydia sequanensis
NCBI taxonomy Id: 1437425
Other names: C. sequanensis CRIB-18, Criblamydia sequanensis CRIB-18
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.