STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSEC_2013Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (283 aa)    
Predicted Functional Partners:
CSEC_2015
Uncharacterized protein conserved in bacteria; Belongs to the UPF0753 family.
 
     0.681
CSEC_0332
Signal transduction histidine kinase.
   
  
 0.671
CSEC_2014
Putative NADH dehydrogenase subunit 5.
 
     0.640
CSEC_1295
Conserved hypothetical protein; Lactoylglutathione lyase and related lyases.
  
   
 0.417
CSEC_1620
Pyridine nucleotide-disulphide oxidoreductase.
   
 
 0.412
kat
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
     
 0.410
Your Current Organism:
Criblamydia sequanensis
NCBI taxonomy Id: 1437425
Other names: C. sequanensis CRIB-18, Criblamydia sequanensis CRIB-18
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