STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSEC_2015Uncharacterized protein conserved in bacteria; Belongs to the UPF0753 family. (1043 aa)    
Predicted Functional Partners:
CSEC_2014
Putative NADH dehydrogenase subunit 5.
 
 0.984
CSEC_2013
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.681
cynT
Carbonic anhydrase.
  
    0.642
CSEC_0638
ABC-type transporter, permease subunit.
  
     0.632
CSEC_0640
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.555
CSEC_2016
Heme-binding protein.
       0.518
CSEC_2018
Conserved hypothetical protein.
 
     0.427
mrpAB
Na(+)/H(+) antiporter subunit A and B.
  
 
 0.412
nuoL
NADH-quinone oxidoreductase subunit L.
 
 
 0.404
Your Current Organism:
Criblamydia sequanensis
NCBI taxonomy Id: 1437425
Other names: C. sequanensis CRIB-18, Criblamydia sequanensis CRIB-18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.