STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSEC_2106Ankyrin repeat-containing protein. (256 aa)    
Predicted Functional Partners:
CSEC_0897
WD repeat-containing protein.
  
 0.972
CSEC_1825
WD repeat-containing protein.
  
 0.972
CSEC_2009
F-box and WD repeat-containing protein.
  
 0.972
CSEC_0576
Putative long-chain-fatty-acid--[acyl-carrier-protein] ligase.
   
 0.837
CSEC_1037
Putative membrane protein.
  
 
  0.813
CSEC_0823
Hypothetical protein.
  
 
  0.810
petB
Cytochrome b6.
  
 
   0.781
CSEC_0754
Putative membrane protein.
  
     0.728
CSEC_1039
Putative membrane protein.
  
 
  0.728
CSEC_0765
Ankyrin repeat-containing protein.
  
     0.724
Your Current Organism:
Criblamydia sequanensis
NCBI taxonomy Id: 1437425
Other names: C. sequanensis CRIB-18, Criblamydia sequanensis CRIB-18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.