STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V490_07717ARID domain-containing protein. (812 aa)    
Predicted Functional Partners:
V490_07512
Uncharacterized protein.
 
     0.942
V490_03915
Uncharacterized protein.
    
 
 0.913
V490_08162
Uncharacterized protein.
    
 
 0.890
V490_04572
Uncharacterized protein.
   
 
 0.880
V490_08447
Uncharacterized protein.
    
 
 0.845
V490_09376
MPN domain-containing protein; Belongs to the actin family.
    
 
 0.812
V490_01654
Uncharacterized protein.
    
 
 0.812
V490_06523
WD_REPEATS_REGION domain-containing protein.
    
 0.758
V490_02922
Uncharacterized protein.
    
 0.732
V490_01495
Uncharacterized protein.
    
 0.732
Your Current Organism:
Pseudogymnoascus sp. VKMF3557
NCBI taxonomy Id: 1437433
Other names: P. sp. VKM F-3557, Pseudogymnoascus sp. VKM F-3557
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.