STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V490_05108Endo-chitosanase; Chitosanase catalyzing the endo-type cleavage of chitosan, the deacylated form of chitin. Chitosanase may be crucial in the degradation of the deacetylated portion of chitin in the fungal cell wall. (351 aa)    
Predicted Functional Partners:
V490_04512
Uncharacterized protein.
    
 0.726
V490_02801
Uncharacterized protein.
    
 0.703
V490_02364
Small nuclear ribonucleoprotein Sm D2.
    
 0.684
V490_07651
DNA polymerase.
   
 0.670
V490_04113
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
  0.663
V490_03951
ERCC4 domain-containing protein.
    
 0.661
V490_01092
Small nuclear ribonucleoprotein G.
    
  0.648
V490_07661
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.610
V490_07775
Sm domain-containing protein.
    
  0.601
V490_07776
Uncharacterized protein.
    
  0.601
Your Current Organism:
Pseudogymnoascus sp. VKMF3557
NCBI taxonomy Id: 1437433
Other names: P. sp. VKM F-3557, Pseudogymnoascus sp. VKM F-3557
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.