STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V490_03472Uncharacterized protein. (1068 aa)    
Predicted Functional Partners:
V490_02886
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.763
V490_06005
CDC73_C domain-containing protein.
    
 0.739
V490_03546
TPR_REGION domain-containing protein.
    
 0.738
V490_07988
DOC domain-containing protein.
    
 0.737
V490_05409
Uncharacterized protein.
    
 0.736
V490_03244
Uncharacterized protein.
    
 0.735
V490_07828
Uncharacterized protein.
    
 0.734
V490_03525
Uncharacterized protein.
    
 0.730
V490_05255
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.720
V490_07960
Uncharacterized protein.
    
 0.690
Your Current Organism:
Pseudogymnoascus sp. VKMF3557
NCBI taxonomy Id: 1437433
Other names: P. sp. VKM F-3557, Pseudogymnoascus sp. VKM F-3557
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.