STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V490_00800Uncharacterized protein. (298 aa)    
Predicted Functional Partners:
V490_01778
Uncharacterized protein.
  
 0.895
V490_02257
Uncharacterized protein.
  
 0.889
V490_08194
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.857
V490_05418
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.857
V490_03594
Uncharacterized protein.
  
 0.857
V490_04312
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.857
V490_01281
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.857
V490_08687
Uncharacterized protein.
  
 0.853
V490_02888
Uncharacterized protein.
  
 0.848
V490_07875
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.848
Your Current Organism:
Pseudogymnoascus sp. VKMF3557
NCBI taxonomy Id: 1437433
Other names: P. sp. VKM F-3557, Pseudogymnoascus sp. VKM F-3557
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