STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BISA_1916Hypothetical protein. (67 aa)    
Predicted Functional Partners:
BISA_1917
Holin family protein.
       0.780
BISA_1915
CHAP domain protein.
       0.768
BISA_1918
Hypothetical protein.
       0.674
BISA_1919
Hypothetical protein.
       0.674
BISA_1921
Hypothetical protein.
       0.674
BISA_1920
Hypothetical protein.
       0.671
BISA_1922
Hypothetical protein.
       0.417
BISA_1923
Bacteriophage protein, PF04883 family.
       0.417
Your Current Organism:
Bifidobacterium saguini
NCBI taxonomy Id: 1437607
Other names: B. saguini DSM 23967, Bifidobacterium saguini DSM 23967, Bifidobacterium sp. AFB23-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.