STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBIA_1162Unannotated protein. (270 aa)    
Predicted Functional Partners:
BBIA_1161
Unannotated protein.
 
 0.983
BBIA_1163
Unannotated protein; Belongs to the ABC transporter superfamily.
 
 0.962
BBIA_0478
Unannotated protein.
 
 0.946
BBIA_0476
Unannotated protein.
 
 0.941
BBIA_0879
Unannotated protein; Belongs to the ABC transporter superfamily.
 
  0.939
BBIA_0475
Unannotated protein.
 
  0.934
BBIA_2036
Unannotated protein.
 
 0.932
BBIA_0881
Unannotated protein.
 
 0.932
BBIA_0096
Unannotated protein.
 
 0.931
BBIA_1160
Unannotated protein.
 
  0.920
Your Current Organism:
Bifidobacterium biavatii
NCBI taxonomy Id: 1437608
Other names: B. biavatii DSM 23969, Bifidobacterium biavatii AFB23-4, Bifidobacterium biavatii DSM 23969, Bifidobacterium sp. AFB23-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.