STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBIA_1452Unannotated protein. (135 aa)    
Predicted Functional Partners:
BBIA_1455
Unannotated protein.
       0.785
BBIA_1453
Unannotated protein.
       0.782
BBIA_1456
Unannotated protein.
       0.779
BBIA_1454
Unannotated protein.
       0.776
BBIA_1457
Unannotated protein.
       0.531
BBIA_1451
Unannotated protein.
       0.524
BBIA_1459
Unannotated protein.
       0.519
BBIA_1458
Unannotated protein.
       0.519
BBIA_1450
Unannotated protein.
       0.454
BBIA_1449
Unannotated protein.
       0.433
Your Current Organism:
Bifidobacterium biavatii
NCBI taxonomy Id: 1437608
Other names: B. biavatii DSM 23969, Bifidobacterium biavatii AFB23-4, Bifidobacterium biavatii DSM 23969, Bifidobacterium sp. AFB23-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.