STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCAL_0473AMMECR1 family protein. (570 aa)    
Predicted Functional Partners:
BCAL_0472
Pyruvate formate-lyase activating enzyme.
 
     0.959
nnrD
Putative sugar kinase; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S-and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.
  
   0.682
BCAL_1695
Z1 domain.
   
  0.553
BCAL_0474
Secreted polysaccharide deacetylase.
  
    0.541
proS
prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]
       0.532
BCAL_0475
Putative two-component system sensor kinase.
       0.483
BCAL_0476
Response regulator receiver.
       0.474
BCAL_0971
Alpha/beta hydrolase.
  
 
  0.448
BCAL_1979
Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
   
    0.448
BCAL_2175
Prolyl aminopeptidase.
  
 
  0.448
Your Current Organism:
Bifidobacterium callitrichos
NCBI taxonomy Id: 1437609
Other names: B. callitrichos DSM 23973, Bifidobacterium callitrichos AFB22-5, Bifidobacterium callitrichos DSM 23973, Bifidobacterium sp. AFB22-5
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