STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCAL_2004Putative cytoplasmic protein; Belongs to the UPF0145 family. (110 aa)    
Predicted Functional Partners:
msrA
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
       0.692
BCAL_2002
lysyl-tRNA synthetase.
  
    0.678
BCAL_2001
Esterase.
       0.662
BCAL_0315
Class II glutamine amidotransferase.
       0.424
Your Current Organism:
Bifidobacterium callitrichos
NCBI taxonomy Id: 1437609
Other names: B. callitrichos DSM 23973, Bifidobacterium callitrichos AFB22-5, Bifidobacterium callitrichos DSM 23973, Bifidobacterium sp. AFB22-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.