STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM25676.1Tricarboxylate transport membrane protein TctA. (499 aa)    
Predicted Functional Partners:
CDM25675.1
Tricarboxylate transport protein TctB.
 
  
 0.956
CDM25674.1
Tricarboxylate transport protein TctC.
  
 0.936
CDM22851.1
Tricarboxylate transport membrane protein TctA.
  
  
 
0.909
CDM25561.1
Tricarboxylate transport membrane protein TctA.
  
  
 
0.901
CDM25566.1
Tricarboxylate transport protein TctC.
 
  
 0.875
CDM22853.1
Tricarboxylate transport protein TctC.
 
  
 0.873
CDM25562.1
Tricarboxylate transport protein TctB.
 
  
 0.753
CDM22852.1
Tricarboxylate transport protein TctB.
 
  
 0.677
Your Current Organism:
Castellaniella defragrans
NCBI taxonomy Id: 1437824
Other names: C. defragrans 65Phen, Castellaniella defragrans 65Phen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.