STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXT57439.1ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa)    
Predicted Functional Partners:
KXT57436.1
O-sialoglycoprotein endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
KXT57438.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
KXT57441.1
Alanine racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.992
KXT57442.1
Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.982
KXT56749.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.955
KXT57437.1
Alanine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.946
KXT58784.1
Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.932
KXT57440.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.855
KXT57443.1
Glutamine--fructose-6-phosphate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.852
KXT56117.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.845
Your Current Organism:
Gordonia sp. QH12
NCBI taxonomy Id: 1437876
Other names: G. sp. QH-12, Gordonia sp. QH-12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.