STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXT56633.1Trigger factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (459 aa)    
Predicted Functional Partners:
KXT57093.1
30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
KXT58795.1
50S ribosomal protein L23; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.992
KXT58789.1
50S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.987
KXT58770.1
50S ribosomal protein L24; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.983
KXT58797.1
50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.980
KXT57722.1
30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.980
KXT57450.1
50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.979
KXT58731.1
30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.976
KXT58796.1
50S ribosomal protein L4; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.976
KXT58794.1
50S ribosomal protein L2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.973
Your Current Organism:
Gordonia sp. QH12
NCBI taxonomy Id: 1437876
Other names: G. sp. QH-12, Gordonia sp. QH-12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.