STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXT56548.1Sodium ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (395 aa)    
Predicted Functional Partners:
KXT56547.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.988
KXT56545.1
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.874
KXT57673.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.858
KXT58847.1
Phosphate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.856
KXT56546.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.847
KXT58259.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.792
KXT57224.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.792
KXT58343.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.781
KXT56724.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.751
KXT56416.1
Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.751
Your Current Organism:
Gordonia sp. QH12
NCBI taxonomy Id: 1437876
Other names: G. sp. QH-12, Gordonia sp. QH-12
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.