STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXT56178.1Arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)    
Predicted Functional Partners:
KXT56600.1
Strictosidine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.866
KXT58965.1
HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.851
KXT55718.1
Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.851
KXT55820.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.830
KXT56961.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.801
KXT56689.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.780
KXT58644.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.773
KXT58532.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.763
KXT57452.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.758
KXT56105.1
Stage II sporulation protein SpoIID; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.756
Your Current Organism:
Gordonia sp. QH12
NCBI taxonomy Id: 1437876
Other names: G. sp. QH-12, Gordonia sp. QH-12
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.