STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IM53_018350Unannotated protein. (469 aa)    
Predicted Functional Partners:
IM53_018340
Unannotated protein.
 
     0.948
IM53_018345
Unannotated protein.
 
     0.947
IM53_018335
Unannotated protein.
 
     0.947
IM53_018355
Unannotated protein.
 
     0.943
IM53_018360
Unannotated protein.
 
     0.942
IM53_018320
Unannotated protein.
 
 
 
 0.882
IM53_013455
Unannotated protein.
    
 
 0.876
GCA_001564415_00639
Unannotated protein.
 
 
 
 0.864
IM53_021380
Unannotated protein.
    
   0.857
IM53_000115
Unannotated protein.
 
     0.786
Your Current Organism:
Xanthomonas phaseoli
NCBI taxonomy Id: 1437877
Other names: X. phaseoli pv. dieffenbachiae LMG 695, Xanthomonas axonopodis pv. dieffenbachiae LMG 695, Xanthomonas phaseoli pv. dieffenbachiae LMG 695
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.