STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001564415_03878Unannotated protein. (130 aa)    
Predicted Functional Partners:
GCA_001564415_03879
Unannotated protein.
      0.858
GCA_001564415_03877
Unannotated protein.
      0.855
IM53_000895
Unannotated protein.
 
     0.764
IM53_008690
Unannotated protein.
  
  
 
0.737
IM53_000625
Unannotated protein.
     
 0.682
IM53_008890
Unannotated protein; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.652
IM53_021310
Unannotated protein.
  
  
 0.646
IM53_008695
Unannotated protein.
  
     0.571
IM53_021320
Unannotated protein.
  
     0.551
glpK
Unannotated protein; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
 
 0.539
Your Current Organism:
Xanthomonas phaseoli
NCBI taxonomy Id: 1437877
Other names: X. phaseoli pv. dieffenbachiae LMG 695, Xanthomonas axonopodis pv. dieffenbachiae LMG 695, Xanthomonas phaseoli pv. dieffenbachiae LMG 695
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.