STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IM53_015580Unannotated protein. (226 aa)    
Predicted Functional Partners:
IM53_015590
Unannotated protein.
 
   
 0.958
IM53_015585
Unannotated protein.
 
   
 0.957
IM53_015600
Unannotated protein.
 
     0.952
IM53_015595
Unannotated protein.
 
   
 0.948
IM53_015610
Unannotated protein.
 
     0.871
IM53_015605
Unannotated protein.
 
     0.748
IM53_015575
Unannotated protein.
       0.527
IM53_015625
Unannotated protein.
       0.488
IM53_015620
Unannotated protein.
       0.488
IM53_015615
Unannotated protein.
       0.488
Your Current Organism:
Xanthomonas phaseoli
NCBI taxonomy Id: 1437877
Other names: X. phaseoli pv. dieffenbachiae LMG 695, Xanthomonas axonopodis pv. dieffenbachiae LMG 695, Xanthomonas phaseoli pv. dieffenbachiae LMG 695
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.