STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EXF46026.1Two-component response regulator; Overlaps another CDS with the same product name. (200 aa)    
Predicted Functional Partners:
EXF46027.1
Two-component response regulator; Overlaps another CDS with the same product name.
     0.994
EXF45872.1
Response regulator/sensory box/GGDEF domain/EAL domain-containing protein.
  
 0.946
EXF46028.1
Sensor histidine kinase; Overlaps another CDS with the same product name.
 
 
 0.913
EXF46815.1
Component of chemotactic signal transduction system; Overlaps another CDS with the same product name.
 
 0.908
EXF46814.1
Component of chemotactic signal transduction system; Overlaps another CDS with the same product name.
  
 0.892
EXF46029.1
Sensor histidine kinase; Overlaps another CDS with the same product name.
 
 
 0.866
EXF45867.1
Sensory box histidine kinase/response regulator.
 
 0.844
ntrA
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.841
EXF43036.1
Sensor histidine kinase/response regulator.
  
 0.839
EXF44671.1
Signal transduction histidine kinase; Overlaps another CDS with the same product name.
  
 0.836
Your Current Organism:
Pseudomonas sp. BAY1663
NCBI taxonomy Id: 1439940
Other names: P. sp. BAY1663
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.