Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EXF45149.1 | EXF45927.1 | BAY1663_02460 | BAY1663_01591 | Cold-shock DNA-binding domain-containing protein. | Hypothetical protein. | 0.779 |
| EXF45149.1 | EXF45928.1 | BAY1663_02460 | BAY1663_01592 | Cold-shock DNA-binding domain-containing protein. | Type III restriction enzyme, res subunit family. | 0.779 |
| EXF45149.1 | EXF45929.1 | BAY1663_02460 | BAY1663_01593 | Cold-shock DNA-binding domain-containing protein. | Hypothetical protein. | 0.779 |
| EXF45149.1 | rplO | BAY1663_02460 | BAY1663_04036 | Cold-shock DNA-binding domain-containing protein. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.695 |
| EXF45149.1 | rplS | BAY1663_02460 | BAY1663_01373 | Cold-shock DNA-binding domain-containing protein. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.692 |
| EXF45149.1 | rplT | BAY1663_02460 | BAY1663_00147 | Cold-shock DNA-binding domain-containing protein. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.777 |
| EXF45149.1 | rpmA | BAY1663_02460 | BAY1663_01139 | Cold-shock DNA-binding domain-containing protein. | 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.698 |
| EXF45149.1 | rpmE | BAY1663_02460 | BAY1663_00668 | Cold-shock DNA-binding domain-containing protein. | 50S ribosomal protein L31; Binds the 23S rRNA. | 0.705 |
| EXF45149.1 | rpsL | BAY1663_02460 | BAY1663_04401 | Cold-shock DNA-binding domain-containing protein. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.751 |
| EXF45149.1 | rpsQ | BAY1663_02460 | BAY1663_04026 | Cold-shock DNA-binding domain-containing protein. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.701 |
| EXF45927.1 | EXF45149.1 | BAY1663_01591 | BAY1663_02460 | Hypothetical protein. | Cold-shock DNA-binding domain-containing protein. | 0.779 |
| EXF45927.1 | EXF45928.1 | BAY1663_01591 | BAY1663_01592 | Hypothetical protein. | Type III restriction enzyme, res subunit family. | 0.999 |
| EXF45927.1 | EXF45929.1 | BAY1663_01591 | BAY1663_01593 | Hypothetical protein. | Hypothetical protein. | 0.999 |
| EXF45927.1 | rplO | BAY1663_01591 | BAY1663_04036 | Hypothetical protein. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.878 |
| EXF45927.1 | rplT | BAY1663_01591 | BAY1663_00147 | Hypothetical protein. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.510 |
| EXF45927.1 | rpsL | BAY1663_01591 | BAY1663_04401 | Hypothetical protein. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.649 |
| EXF45927.1 | rpsQ | BAY1663_01591 | BAY1663_04026 | Hypothetical protein. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.657 |
| EXF45928.1 | EXF45149.1 | BAY1663_01592 | BAY1663_02460 | Type III restriction enzyme, res subunit family. | Cold-shock DNA-binding domain-containing protein. | 0.779 |
| EXF45928.1 | EXF45927.1 | BAY1663_01592 | BAY1663_01591 | Type III restriction enzyme, res subunit family. | Hypothetical protein. | 0.999 |
| EXF45928.1 | EXF45929.1 | BAY1663_01592 | BAY1663_01593 | Type III restriction enzyme, res subunit family. | Hypothetical protein. | 0.999 |
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