STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EXF42696.1Ribonucleotide reductase, alpha subunit. (102 aa)    
Predicted Functional Partners:
EXF46281.1
Bacterioferritin.
   
    0.669
EXF45075.1
Chromosome segregation ATPase.
   
    0.663
EXF46360.1
Surface antigen.
   
    0.653
mucA
Anti-sigma factor MucA.
   
    0.646
osmC
Osmotically inducible protein OsmC.
  
    0.645
EXF42695.1
Sensory box histidine kinase.
       0.425
EXF47455.1
Putative transmembrane protein.
   
  
 0.409
Your Current Organism:
Pseudomonas sp. BAY1663
NCBI taxonomy Id: 1439940
Other names: P. sp. BAY1663
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.