STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y717_24930Unannotated protein. (314 aa)    
Predicted Functional Partners:
Y717_25610
Unannotated protein.
  
 
 0.935
Y717_24925
Unannotated protein.
  
 
  0.927
pgi
Unannotated protein; Belongs to the GPI family.
  
 
 0.910
Y717_30610
Unannotated protein.
    
 0.905
xylA
Unannotated protein; Belongs to the xylose isomerase family.
     
 0.903
nagB
Unannotated protein; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily.
  
 
 0.901
glpX
Unannotated protein.
    
  0.901
Y717_32100
Unannotated protein; Belongs to the glycosyl hydrolase 31 family.
   
 
 0.900
Y717_07295
Unannotated protein.
   
 
  0.898
Y717_24670
Unannotated protein.
 
    0.847
Your Current Organism:
Streptomyces scopuliridis
NCBI taxonomy Id: 1440053
Other names: S. scopuliridis RB72, Streptomyces scopuliridis NRRL B-24574, Streptomyces scopuliridis RB72, Streptomyces sp. RB72
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.