STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y717_32360Unannotated protein; Belongs to the glycosyl hydrolase 2 family. (861 aa)    
Predicted Functional Partners:
Y717_11710
Unannotated protein.
 
 0.590
Y717_20475
Unannotated protein; Belongs to the carbohydrate kinase PfkB family.
   
    0.583
Y717_00575
Unannotated protein; Belongs to the carbohydrate kinase PfkB family.
   
    0.583
Y717_14265
Unannotated protein.
 
 0.567
Y717_03210
Unannotated protein; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.566
GCA_000718095_05840
Unannotated protein.
 
  
 0.562
Y717_05160
Unannotated protein.
 
     0.541
Y717_30005
Unannotated protein.
  
 
  0.529
GCA_000718095_05829
Unannotated protein.
  
     0.500
Y717_32355
Unannotated protein.
       0.499
Your Current Organism:
Streptomyces scopuliridis
NCBI taxonomy Id: 1440053
Other names: S. scopuliridis RB72, Streptomyces scopuliridis NRRL B-24574, Streptomyces scopuliridis RB72, Streptomyces sp. RB72
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.